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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82715275, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.48
Topology Confidence: 0.12
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNLILWLI IAAVLVTVMN NFSSPNEPQT LNYSDFIQQV KDGKVERVTV DGYIITGKRT  60
   61 DGDNFKTVRP AITDNGLIGD LVDNHVVVEG KQPEQQSIWT QLLVASFPIL VIIAVFMFFM 120
  121 RQMQGGAGGK GGPMSFGKSK ARLLSEDQVK TTLADVAGCD EAKEEVGELV EFLRDPGKFQ 180
  181 RLGGRIPRGV LMVGPPGTGK TLLAKAIAGE AKVPFFTISG SDFVEMFVGV GASRVRDMFE 240
  241 QAKKHAPCII FIDEIDAVGR HRGAGMGGGH DEREQTLNQL LVEMDGFEMN DGIIVIAATN 300
  301 RPDVLDPALL RPGRFDRQVV VGLPDIRGRE QILKVHMRKV PIGENVNPAV IARGTPGFSG 360
  361 ADLANLVNEA SLFAARSNKR LVEMKEFELA KDKIMMGAER KTMVMSEKEK RNTAYHEAGH 420
  421 AIVGRLVPEH DPVYKVSIIP RGRALGVTMF LPEEDRYSLS KRALISQICS LYGGRIAEEM 480
  481 TLGFDGVTTG ASNDIMRASQ LARNMVTKWG LSEKLGPLMY AEEEGEVFLG RSAGSQHASV 540
  541 SGETAKLIDS EVRSIIDQCY ATAKQLLIDN RDKLEAMTEA LMKYETIDAD QIDDIMAGRT 600
  601 PREPRDWDDD KHSGTPAAQD ERPESPIGGP AAEH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle