YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|191639398, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLLLGRYI PGDSWVHRLD PRTKLIASFY YIGIVFLANN WQTYLMMFVA TLFMIWLSGI  60
   61 KIGFFLKGVR PLIWLILFTV VLQVLFVRGG TVYWHWGWLW ITEFGLINGA FIFVRFVLII 120
  121 FMSTLLTLST QPLSLADAVE SLLKPLRVIR VPVTELALVL QIALRFVPTL MDQTTKIMNA 180
  181 QRARGVDFGE GNIFQQMKAV VPLLIPLFVS SFTTADELAT AMEARGYQGG DDRTKYRILR 240
  241 YHRRDWVAAG GMLVLTGLLL LLRA

Type	Start	End	Confidence
Cytoplasmic	1	20	0.77
Transmembrane Helix	21	38	0.75
Non-Cytoplasmic	39	43	0.72
Transmembrane Helix	44	65	0.90
Cytoplasmic	66	71	0.89
Transmembrane Helix	72	92	0.92
Non-Cytoplasmic	93	105	0.70
Transmembrane Helix	106	128	0.82
Cytoplasmic	129	242	0.73
Transmembrane Helix	243	262	0.90
Non-Cytoplasmic	263	264	0.78