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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|120560667, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.29
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKVFIGVNL RPFTYKLVIC TLYILSLLWI PQNGWAQPLS AANTQLKFEH IRSEEGLNQN  60
   61 TITSLFMDSA GMLWIGTQDG LHSYNGHSFN LFIHSPNDPT SISESYVSDI IQDPEGYIWV 120
  121 GTFSQGVNRL DLSTGKFEHF GLEQGLTEPR VTKLNIVGNT LWIGTQSGLF SLSTKTQRIN 180
  181 QVNLGNSVEP YITSLANVDN TYLLAGTQNS GTFAVSANTI TRLNVPQNVT AYQIKANSKR 240
  241 SIDLALGNQL WRYDLISQQG EVLWQVDPDI PYIKDFIQTP LGVIWAVGPE AGLIQLDREA 300
  301 GQLIATYHKY DTKRTNSISE NNILSLLQDP FGNLWLGTSY SGLNKINTRR QFFQHLYEST 360
  361 IELPQQSNNI RSLLRSKDGA LWIGTDGAGL KRLPQGSNQY DYYSSYFAKA LGSSQRHLNL 420
  421 VIRDIAQDNQ DVLWIASNYG LGRLTPSGEF SLLKVTQNQE HSEPNYIRSL EIDHQDRLWI 480
  481 ATSHALYRKA LDKDEFIPVS LANIENFYPT QNLLLTLKAD KYDLWIGSLN GLIKLDMKTE 540
  541 LGQVFYHQPN HKNSIINNRI RDILVASNGD IWFATHGGIS KWSSTNADVG FSHYTREQGL 600
  601 PSNTIYALLE DQNHHIWFSS NAGIGKLNPI THRIISFNEQ EGLQSLEFNG AVKLKDSDGD 660
  661 LWFGGINGIN RFNPQTIPEQ RGEAKVALTG YKIAGKHHTI LDLSRPPPIV MNYGEQLVSF 720
  721 EVTSLDFSYT GKNRFSYFLE GFDHQWHQLP AGNEITFTNI NPGQYVLHVR HSLQYNREGS 780
  781 QTLLVNLKVQ APFYRTPFAY TLYCLLAIGL LIWGLHWRKQ KRQQQREFET SIRASEERLK 840
  841 LALWASGDGM WDWNIKENKV YRTNMDASVS HWSSHNLLHE NMHPEDREKF KYELAEHLQG 900
  901 RTPFFEIEYR IEGAFGKWIW ILDRGKVVET DAHMQPMRMT GTNRNITSRK LIENELVLSS 960
  961 QVLNSMNEAV VVAGLDYKIR SVNPAFSAIT GYSERQITDK YLVHLAYKQQ RELFNSIEQQ1020
 1021 LLRHKHWVGE IWIRNKQRKA ILVWLEINQV IDIKGETSHF VAVFTDITER KKAEQDLRFL1080
 1081 ASFDTLTGLP NRTLFQDRLN HAITQAHRAN NIVALLFLDL DRFKHINDSM GHHVGDLLLK1140
 1141 AAAKRLQNAV REGDTVARLG GDEFTIILEG VAKTKAATLI SEKVLRAFQT PFLLEDKSLT1200
 1201 ISTSIGISLY PNDADNADSL IKFADTAMYH AKSLGRNNFQ FYTHKLNEIA TRHVLLEAGL1260
 1261 KQAIHRNELS LVYQPKFSLR DGSLTGLEAL LRWHHTELGP ISPVEFIPLA EETGIINQIG1320
 1321 HWVINHACQQ LAEWNALGFN NISMAVNLSA RQLKADIIST IEVALAVSGL PAQSLELELT1380
 1381 ESMIMGNPQD SVSILSKLKA LGLTIAIDDF GTGYSSLSYL KRFPIDTLKI DREFVRDITN1440
 1441 DPDDAAITSA IIALAHSLEL NVVAEGVETQ AQLNFLGLQG CDEVQGFLLS KPLSAKDCLT1500
 1501 LLGNQSKQLM Q

YRC Informatics Platform - Version 3.0
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