YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119378021, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWIKASIRW VWGRFTWFWR VISRPSSFLS IGFLTLGGFI CGVIFWGGFN TALEVTNTEK  60
   61 FCTSCHEMRD NVYQELMPTV HFSNRSGVRA SCPDCHVPHQ WTDKIARKMQ ASKEVWGKIF 120
  121 GTISTREKFL EKRLELAKHE WARLKANDSL ECRNCHAAVA MDFTKQTRRA AEIHERYLIP 180
  181 GEKTCIDCHK GIAHQLPDMT GIEPGWLEPP TLRDDSQAWL GGGDEAVHRY LATIEAR

Type	Start	End	Confidence
Cytoplasmic	1	20	0.91
Transmembrane Helix	21	48	0.84
Non-Cytoplasmic	49	237	0.94