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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94554478, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTIELGVQ GMTCASCVAR VERALKKVDG VENASVNLAT ERATVTYDPA VTTPQVLLER  60
   61 VKDVGYEPVV SHLELGVQGM TCASCVGRVE RALKKVDGVL NTSVNLATER ARVTYLPSSV 120
  121 SPGQLKAAIR EAGYEVLEAP AGVSREEQER EARAREVSHL RRQVLFSAVF ALPLLLLAML 180
  181 PMLVPAVQDW LMTTFGHGVM TTLNWVMLAL ALPIQFGPGR RFYRLGWKSL QHRSPDMNAL 240
  241 VMIGTTAAFL YSLVATVAPG IFPEGTAHVY YEASGVVITL ILLGKYFEAI AKGRSSEAMK 300
  301 KLLSLQAKTA RVVRSGQELE LPTDEVLVGD LISVRPGEKI PVDGEVVQGA SFVDESMITG 360
  361 EPVPVSKQPG AAVVGGTING NGALTFRATR IGADTALAQI IQLVETAQGS KPPIQGLADR 420
  421 VVAVFVPVVL GIAALTFLLW LLLGGQTALS FALITTVAVL IIACPCAMGL ATPTSIMVGT 480
  481 GKAAELGVLF KDGGALERLQ DVRIVALDKT GTLTRGRPEL TDLVTVPSLD RSEVLKLVAA 540
  541 AEEQSEHPIA RAIVDAAKRA GLTVQKPEAF EAVPGYGLDA WVEGHHVQVG ADRYMAKLGL 600
  601 DVNTFAPQAQ QLGDEGKSPL YAAIDGQLAA VLAVADPIKD GSQEAVNALH RMGLRVAMIT 660
  661 GDNTRTARAI ARQLGIDEVL AEVLPSGKSD AVRELQATGH KVAFVGDGIN DAPALAQADV 720
  721 GLAIGTGTDV AVETADVILM SGDLRGVPNA FALSRATLRN IRLNLFWAFA YNIVLIPVAA 780
  781 GVLYPAFGIL LSPVLAAAAM GFSSVFVLSN ALRLRGFRPP VRPLQSQPLG QTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle