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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114564836, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRSFLKAS AALSCVATVT GCNTSSDDAN VIPPTPPVSD ETITWSACLV NCGSNCPVKV  60
   61 FSSDGIITRV EADNETTDEY GVNHQIRACA RGRSLRQRTY AADRLKTPMK RVGKRGEGKF 120
  121 VPISWDEAAS TIASELQRIA NEYSNKSILK IYGTGAYYGF SSSSCFNRVL NLNGGFLNIY 180
  181 GNYSWAQQTE AAAATGFSST SGSNLLALND SDLFIGLGYN PSEMRQSGSG EGYDFLNALQ 240
  241 KNNGLEVIMI DPRYTDSMAG KEDNWFPIRP GTDAALCEGI AYEMISSGWV DNHSKNFLDK 300
  301 FCVGYDKESL INLKAEFEIS EDPEKKAYIP YINPNDNYKD YILGEGTFIS TGPKTPSWAA 360
  361 KICGISETHI KSIATKLMNA RAPFIVAGAG INRHANGEQA MRSCYMLSFL TGKVGQPGVS 420
  421 NGALPSQGSL SRSGMSGLSN PIKESISCFT FPDAIERGHE MTTRKDGIRG TADLDTPLGA 480
  481 DTKAIFAINS NALINQHSDS NGIAKILEDE TKCELIVVCD CWMTSSAKFA DILLPDTSWL 540
  541 ESNDLVNDSY ASGIMGYLVA MKAAIKPLWE CKSMYDMCAL IAEKMGKLGE YTEGKDEAGW 600
  601 LTELYEKTRT NSNNANAIPP LPSTYEEAQA QGVFRAFDGK TVVALEDYIN GTDTLNTPSG 660
  661 KIEIFSLELA QKGTDWEFDS TVKGNYITSI PMYQATWEGY EDSETSEDYP FQLVGYHTKG 720
  721 RTHSSYHNVP WLREAVEDAV WMNPADAYKQ GLTQGSKALI WSQRGTIELP VRVTPRVAPG 780
  781 VLALGQGAWY TPDPSGRVGP SGHIIDIGGC INTLTRYQPS PLAKGNPQHT NRVQIASA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle