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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|114333447, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM  60
   61 ADATYIEPIH WEVVRNIIAK ERPDAILPTM GGQTALNCAL QLEAQGVLKE FNVEMIGATA 120
  121 DAIDKAEDRS RFDKAMKSIG LDCPRAGIAH NMDEAYGVLD MVGFPCIIRP SFTMGGSGGG 180
  181 IAYNKEEFEE ICSQGLDLSP TNELLIDESL IGWKEYEMEV VRDRNDNCII VCAIENFDPM 240
  241 GVHTGDSITV APAQTLTDKE YQLMRNASLA VLREIGVETG GSNVQFGICP DTGRMVIIEM 300
  301 NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELSNDIT GGKTPASFEP AIDYVVTKIP 360
  361 RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGRNGFD SVVDLQSPEA 420
  421 IQRIRHELKE PGCDRIWYIA DAFRAGLSRD DIFTLTNIDH WFLVQIEDLI TQEAKVAELG 480
  481 MSGLEKNYLR QLKRKGFSDA RLADVLGVNE SEIRKLRQRH EIHPVYKRVD TCAAEFSTDT 540
  541 AYMYSTYEEE CEANPSNRDK IMILGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC 600
  601 NPETVSTDYD TSDRLYFEPV TLEDVLEIVR IEKPKGVIVQ YGGQTPLKLA RELEAAGVPI 660
  661 IGTSPDAIDR AEDRERFQQA IQRLNMKQPE NATVTTVESA VIEAEKIGYP LVVRPSYVLG 720
  721 GRAMEIVYDK QDLLRYFNEA VKVSNASPVL LDHFLDDAIE VDIDAVCDGE TVVVGAIMEH 780
  781 IEQAGVHSGD SGCSLPPYTL SADIQARMRD QVSKLAFELG VIGLMNVQFA VKDNEIYMIE 840
  841 VNPRAARTVP FVSKATGVPL AKIAARVMAG QSLISQNFTK EVIPPYFSVK EVVLPFNKFP 900
  901 GVDPLLGPEM RSTGEVMGVG DTFAEAYAKA QLGATSEVPK SGRALLSVRN SDKKRVADLA 960
  961 SKLIELGYEI DATHGTAIIL GEAGINPRLV NKVHEGRPHI LDRIKNGEYT YIVNTTEGRQ1020
 1021 AIEDSRQIRR GALRYKVNYT TTLNAAFATC LAHSADDRIK VTSLQELHKR IKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle