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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83750935
Protein type: Transmembrane
Type Confidence: 0.48
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWGLIALFL IVLFSFFNGN RQRASNGEVS YSEFLQKIDN NELKTVTIQG QKLTGQTADR  60
   61 RMISTYAPRD PGLVQRLNTN KVNIRAVPES SGNSIFLNLL FSLLPVLIIV GAWIFFMRQM 120
  121 QGGSRGALGF GKSKAKLLTE AQGRVTFKDV AGVEEAKQDL QEIVDFLREP QKFQRLGGRI 180
  181 PRGVLLVGPP GTGKTLLARS IAGEANVPFF TISGSDFVEM FVGVGASRVR DMFEQAKKNA 240
  241 PCIIFIDEID AVGRHRGAGL GGGNDEREQT LNQLLVEMDG FEPNESIILI AATNRPDVLD 300
  301 PALLRPGRFD RQVVVPNPDV AGREKILEVH VRNVPLAPNV NLRVLARGTP GFSGADLMNL 360
  361 VNEAALMAAS RNKKVVTMQE FEDAKDKVMM GAERRSTAMT QEEKELTAYH EAGHAIVALN 420
  421 VPVSDPVHKA TIVPRGRALG MVMQLPEGDR YSMSYLWMVS RLAIMMGGRV AEELKFGKEN 480
  481 ITSGAASDIE QATKLARAMI TRWGFSDMLG HVAYGDNQDE IFLGHSVART QNISEETARM 540
  541 IDAEVRRLID DAYKTATKIL KTQNKQWLAL AQGLLEYETL TGTEINEVIA GKPPSRTQGS 600
  601 DTAPLRTSSV PKIGAKNSKG ASKSGDAEET EPSVGTKATA ASSAKKVVKN ASAKSAEKKA 660
  661 SGTQVKAATP AATSIKATSA KVASAKAETE NVASAQAATE NVAMVKAATA NVAKKSVESA 720
  721 QADDAEKKRL EEHNKSAHNK KGNLTAGAAS NTEDEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle