YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67545817, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRECLDEGKY AECPAHGACH DRNGPPGAGF SDFRTAADSL IDLFCGFVMV GVIHRKMANP  60
   61 AAVCERYDAP ALRPPHDCAY SSAYAAPAIR RRQQGVFVFP SIVAIFVGAG LGAVLRWFLG 120
  121 LALNAFVPAM PLGTLAANLL GGYAIGIAAV VFTSRVGLPP EWRLFVITGF LGGLTTFSTY 180
  181 SVEVMTHALQ GEFGWAFAVA VLHLTGSFTL TALGMWTASA WFAPA

Type	Start	End	Confidence
Cytoplasmic	1	95	0.85
Transmembrane Helix	96	119	0.91
Non-Cytoplasmic	120	131	0.83
Transmembrane Helix	132	153	0.90
Cytoplasmic	154	163	0.76
Transmembrane Helix	164	182	0.94
Non-Cytoplasmic	183	195	0.76
Transmembrane Helix	196	218	0.88
Cytoplasmic	219	225	0.76