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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71362607, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPYSYSHQ TQAPTYKTLK SATLIIGSTL LFSVSAHAVD TNTAVASKTI NPTSINTSAI  60
   61 NLTVMKENPT VLSETQRVTR AKSNTFTPKA TQAKTDQAIY SVDAIHHPVW AKNGMVATQE 120
  121 ALASDIGLKI LKDGGNAVDA AVAVGFALAV TLPRAGNIGG GGFMMVYDAK QGKTVALDYR 180
  181 EKAPSSASRD MYLDKEGNAV SDLSRYHGLA VGVPGTVAGL LKALEDHGTM SRGQVLAPAI 240
  241 ALAENGIEVT AGLSESLEAL SDRLQKWPST KKIFFKADGS TYQPGERLKQ PELAKSLKLI 300
  301 AAKGSDGFYK GETARKLVKA VNEAGGKMSL QDLANYQAIA RTPVKGDYRG YEIVSMPPPS 360
  361 SGGIHIVQIL NILEGYPLKD YGQNSAQTIH LMAEAMQLAY ADRSEYLGDS DFIDVPASGL 420
  421 TAQPYADKLR TLINPNKATP AATIKANNPL PYESDQTTHF SIVDKDGNAV ANTYTLNFSY 480
  481 GTGLVAEGTG ILLNNEMDDF SAKPGVPNGY GLIGGDANAV EANKRPLSSM SPTIVFKDSK 540
  541 PYIVTGSPGG SRIITTVTQV ISNVIDHDMN IAEATHAPRI HDQWLPDEIR IEKALNIDTI 600
  601 KKLESMGHKV SQQSAMGSTQ SIMVTPNGVY GSSDPRIVDA AVVGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle