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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84317713, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSGLSRLGI ALLAAMFAPA LLAADLEKLD VAALPGDRVE LKLQFDEPVA APRGYTIEQP  60
   61 ARIALDLPGV QNKLGTKNRE LSVGNTRSVT VVEAKDRTRL IINLTTLSSY TTRVEGNNLF 120
  121 VVVGNSPAGA SVASAAPVKA SPAPASYAQP IKPKPYVPAG RAIRNIDFQR GEKGEGNVVI 180
  181 DLSDPTLSPD IQEQGGKIRL DFAKTQLPDA LRVRLDVKDF ATPVQFVNAS AQSDRTSITI 240
  241 EPSGLYDYLV YQTDNRLTVS IKPMTMEDAE RRKKDNFAYT GEKLSLNFQD IDVRSVLQLI 300
  301 ADFTDLNLVA SDTVQGNITL RLQNVPWDQA LDLVLKTKGL DKRKLGNVLL VAPADEIAAR 360
  361 ERQELEAQKQ IAELAPLRRE LIQVNYAKAA DIAKLFQSVT SSGEEKENSR GSITVDDRTN 420
  421 SIIAYQPQER LDELRRIVSQ LDIPVRQVMI EARIVEANVG YDKSLGVRWG GAYHNGNWNS 480
  481 YGKNGNMGIK DKEGYNCGPF QGQCTFPTRD NSPTPFVDMG AKDATSGIGI GFITDNIILD 540
  541 LQLSAMEKTG NGEVVSQPKV VTSDKETAKI LKGSEIPYQE ASSSGATSTS FKEAALSLEV 600
  601 TPQITPDNRI IVEVKVTKDA PDFQNALNGV PPINKNEVNA KILVNDGETI VIGGVFSNTQ 660
  661 TKAVDKVPFL GDLPYLGRLF RRDTVSDTKN ELLVFLTPRI MNNQAIAIGR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle