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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|105894966, gi...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADASLLRRA LHSAGRWLHR WQNWLGGALP VFGALAACRL WPHPPLRDWK PSSVAVTDAQ  60
   61 GRLLRLTLAK DDRYRLWVPL DRMSPQLVEA VMLHEDRWFR WHPGFNPYGL LRGAWITYVR 120
  121 GGNPQGGSTL TMQLARSLWK LNTRTPAGKL EQVARAVQLE LFYSKRQILE AYLNDAPYGR 180
  181 NVEGAGTASV VYFDRMPDAL TLPEALALAV IPQDPARRVR GGQDAINRAL AASRNRLYAR 240
  241 WLTKHPRDAS LAPLFALPLA MRPLSALPFD APHAVDQALA ARSAWRTTSG ATAADGDRDD 300
  301 GSDGGARLVT TLDLDLQRTL ERQISRYVAR NDTRGVRNAA AILVDARDMG VKALVGSANF 360
  361 FDRTIDGQVN GTLARRSPGS TLKPFIYALG FDQGVLHPQT VLRDVPTSFG PYAPENFDGH 420
  421 FLGPITATDA LNRSRNVPAV WVASQLKSPD LYRFLQDAGV RRLASAQHYG LALVLGGGEV 480
  481 TMQDLAALYA MLANRGEFRP LRLRADEPAL PGRRLLSTEA SYMTMDMLRQ HLRPDETSGA 540
  541 QPSSVPVYWK TGTSWSFRDA WTAGVFGPYV LVVWVGNFDN STNTAFVGVD AAAPLFFQGV 600
  601 DAMNAERTLV EPPRAVPPNL KRVRVCLASG DLPNEWCPQQ GWTWFIPGTS PIRVSTVHRP 660
  661 VVIDDATGQA ACPPYDGKRT HTEVFEFWPS DLQQVFAQAG IPRRRPPQNA ACRDAGQVEG 720
  721 DPPRITSPLR GSTYAMRVKS TDETRIAFNA TADASAHALY WFVNDAYVGR SAPGDALFWQ 780
  781 PRTAGSYTVR VVDDHGRSDQ RPLGVGLEQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle