YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71545357, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSVGLTPLG LALLDLFLPR RCAGCRNTWL RSQEGFWCER CRAELPWITH PLCPRCGRPY  60
   61 PGSPASPDHR CGDCLLGAYP FDSARSATLY TGVVRDRIHQ LKFGCQVEWA PALTELLLDA 120
  121 WGRAPLPEVR LILPVPLHLK RLQERGFNQS GLLAKTLAKR LGLPFSHDLL RRERWTEPQT 180
  181 RLSRQERLTN VKNAFRVKDE TRVEGKSILI VDDVFTTGTT LSECARALKK GGAASVHALT 240
  241 VARALPDGNS SSQGLHNGE

Type	Start	End	Confidence
Signal Peptide	1	24	0.94
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	259	0.99