YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194562018, gi...
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFATRGRFA HAAIVPATAA VAAAMLLAAA PAGAADMNAV NRASALASSV TVGSAAPSLG  60
   61 VGAVLQTLVG LAVVIGLVFG CAWLARRFGF QPARRGGPLK VVSSVGVGAK ESATIVEIGD 120
  121 TWLVLGVAPG NVRLLHTLPA GSLPAAAASG DAHASGAASG QGLPGTFGAR FRDALAGEAA 180
  181 KRFGRGKDR

Type	Start	End	Confidence
Cytoplasmic	1	8	0.60
Transmembrane Helix	9	32	0.58
Non-Cytoplasmic	33	62	0.85
Transmembrane Helix	63	85	0.90
Cytoplasmic	86	189	0.90