YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67655588, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEAACQQHS FPSRHQWRGF SEQLMNKQLI AAPLLLSLAS VAAAQSSVTL YGIVDAGVTY  60
   61 RSNERVGSAG AYTGHSSVGL TTGNLSGSRW GIKGSEDLGG GMRALFVLEN GFDITNGTSG 120
  121 QGGRQFGRQA FVGVGSDRYG TVTLGRQYTS LDDFVSPVGP SSFIGGFGAH PGDIDDLDQT 180
  181 ARVDSSIKYT SANYSGFTFG ALYGFGGQPG SMKQRNTWSV GAAYAAGPLR VGVGYERSDN 240
  241 SKKGATDPTA GKWQSTDDGL FNSSINEGYA SAQSQQVIAT GATYDFGPAV VGVNYSNVQY 300
  301 RGGAQSLFSG HATFNVAGVF TRWNVQPQTQ LFAGYSYTRG SDVDGIDNRA QYHNVTLGAV 360
  361 YDLSKRTSVY LLGAYQHASG TTLDALGRPV AATASVSDKA NGHSSDSRSQ AIVSLGLRQK 420
  421 F

Type	Start	End	Confidence
Signal Peptide	1	44	0.81
N-region	1	35
H-region	36	41
C-region	42	44
Cleavage Site	44	45
Non-Cytoplasmic	45	421	0.98