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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110167981, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKGSSKPYS QKAYRWNRES YSRQRRYIDI WSFVLLWLTW LWVDKKDWSY RGGVTEEKKN  60
   61 LRRRKQAIWV RETMLELGPT FIKLGQLFST RADLFPSEYV EELSKLQDKV PAFNYEQIET 120
  121 IIEEDLGKKV EELYSSFDPV PLAAASLGQV HRAQLHSGED VVVKVQRPGL KKLFQIDLAI 180
  181 LKGIARYFQS HPQWGRGRDW LGIYEECCRI LWLEIDYLNE GRNADTFRRN FRSCNWVRVP 240
  241 RVYWRYSAPR VLTLEYIPGI KISNYEALEA SGQDRKALAR MGAEAYLQQL LNDGFFHADP 300
  301 HPGNIAVSPE GGLIFYDFGM MGQIKSNIRE KLMETLYGIA SKDAERVIIS LTDLGALKPT 360
  361 GDMGPVRRSI QYMLDNFMDK PFEAQSITAI SDDLYEVAYD QPFRFPATFT FVMRAFSTLE 420
  421 GVGKGLDPDF SFMEVAQPFA MQLMSDEDSQ KTIFNELGRQ AAQVSSTALG LPGRIEDAID 480
  481 KLEQGDIKVR VRAVETDRLV RRVSNVQMGT NYALLISGFT LSATILYVNN QGGLALVLVL 540
  541 LVVVMGFAFI RLLKRIDRLD KMM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle