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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71730834, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDMKPEQRH MLQRCWVDVL SVIRHAACLR YLALPALLPS AVALLLGCLA AITLPRLPPV  60
   61 WVLWIFLFAG VMLAVVVRRV AWCGVVLFGF ANCCLHGQFG LRHQLSFALE GRDLVLRGRI 120
  121 VSLPVPETRR TRFLLRVDTD QDQEPALRGR LLQLSWYDEN KAVAPGPRSA LHAGSVWQLH 180
  181 VRLRAPHSLL NPGGFDSERY ALAQGIVATG YVRTPTMARE LAAATGINAW RERMSARIAD 240
  241 AVLLEASVYL RALALGDTRG LSQQDWEVLR ATGLTHLIAI SGFHVGMVAG ACALLVSLLW 300
  301 RVFPHLAWRW PRPLAMALIA VPAAAGYTVL AGASLPTVRT ALMIGIVALA RLTRRRAMPG 360
  361 HVLGLALLVV LVWDPLAILS AGFWLSFAGV AWLMWCMQDG HAAPWRGFLS AQGVATLGLL 420
  421 PFTVALFGQV SFVGPLANLI AIPLWTFVVV PLVLLGTALE ALVPGWGSPM WRLGGNCFQW 480
  481 SWQLFEYLAQ TDFALWWLPE SDGVALGLAL LGAFWLLLPR GTPGKWLALL LWLPLLWPER 540
  541 ERPRPGEFEM QMLDVGQGLS IVVRTSGHTL LYDAGPAVND GFDAGERVVV PALRASGIRR 600
  601 LDALVASHAD SDHVGGLPAV LKAYPVDISY APPDAPLDVE RRCSAGDSWL WDGVQFRFLH 660
  661 PAPHSRYLGN ESSCVLRIDT RWGSALLTGD IGKVVERGLL SQDRESVRAD VVVVPHHGSA 720
  721 GSSSLGFVRA VNARLALVSS GDGNRFGHPR CSVVESWSET ADVLLTAHSG AVRIWVGQQG 780
  781 LQLRERRVWR RRFWDAVERR RSAAILSATE DVSKERRRNE TCWNW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle