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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|171098769, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIKTSLPR RKFDVVIVGA GGSGLRAALQ LSRAGLSVGV LSKVFPTRSH TVAAQGGIGA  60
   61 SLGNMSEDNW HFHFYDTIKG SDWLGDQDAI EFMCREAPNV VYELEHFGMP FDRNADGTIY 120
  121 QRPFGGHTAN YGEKPVQRAC AAADRTGHAL LHTLYQQNVE AKTQFFVEWM ALDLIRDADG 180
  181 DVLGVTALEM ETGDVYIMEG KTTLFATGGA GRIFAASTNA FINTGDGLGM AARSGIALQD 240
  241 MEFWQFHPTG VAGAGVLITE GVRGEGGILR NANGERFMER YAPTLKDLAP RDFVSRSMDQ 300
  301 EIKEGRGVGP NKDHVLLDLS HIGAETIMKR LPSIREIALK FANVDAIKEP IPVVPTIHYQ 360
  361 MGGIPTNIHG QVVGTSRDHK EPVNGFYAVG ECSCVSVHGA NRLGTNSLLD LVVFGRAAGN 420
  421 HIVEHVKNQK EHKPLPADAG EFSLARLNKL DKSSSGEYTQ DVANDIRATM QKHAGVFRTS 480
  481 ALLKEGVEQM AGLAARVESI HLKDKSKVFN TARVEALELE NLIEVARATM VSAEARKESR 540
  541 GAHAHSDYEH RDDDNWLRHT LWYSEGDRLD YKPVQMKPLT VESVPPKPRT F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle