YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74017650, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVVAPGRRV RVATSVAAAV AIAASLACVP AGAADMNAVN NAGSIASSVM VGSAVPSLGV  60
   61 GAVLQTLVGL AVVIGLVFGC AWLARRFGFQ PARRGGPLKV VSSVGLGAKE SATIVEIGDT 120
  121 WLVLGVAPGN VRLLHTLPAG SAVAPAPADL PAGTRSADRG QPGTFGARFR DALAGEAAKR 180
  181 FGRGKDTR

Type	Start	End	Confidence
Cytoplasmic	1	11	0.66
Transmembrane Helix	12	34	0.65
Non-Cytoplasmic	35	61	0.88
Transmembrane Helix	62	84	0.91
Cytoplasmic	85	188	0.94