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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75176220
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LILWLVIAVV LMSVFQSFGP SESNGRKVDY STFLQEVNND QVREARINGR EINVTKKDSN  60
   61 RYTTYIPVQD PKLLDNLLTK NVKVVGEPPE EPSLLASIFI SWFPMLLLIG VWIFFMRQMQ 120
  121 GGGGKGAMSF GKSKARMLTE DQIKTTFADV AGCDEAKEEV AELVEYLREP SRFQKLGGKI 180
  181 PKGVLMVGPP GTGKTLLAKA IAGEAKVPFF TISGSDFVEM FVGVGASRVR DMFEQAKKAA 240
  241 PCIIFIDEID AVGRQRGAGL GGGHDEREQT LNQMLVEMDG FEGNEGIIVI AATNRPDVLD 300
  301 PALLRPGRFD RQVVVGLPDV RGREQILKVH MRRVPLAPDI DAAIIARGTP SFSGADLANL 360
  361 VNEAALFAAR GNKRVVSMIE FEKAKDKIMM GAERRSMVMT EAQKESTAYH EAGHAIIGRL 420
  421 VPEHDPVHKV TIIPRGRALG VTFFLPEGDA ISASRQKLES QISTLYGGRL AEEIIYGPEH 480
  481 VSTGASNDIK VATNLARNMV TQWGFSEKLG PLLYAEEEGE VFLGRSVAKA KHMSDETARI 540
  541 IDQEVKALIE RNYNRARQLL TDNMDILHAM KDALMKYETI DAPQIDDLMA RRDVRPPAGW 600
  601 EEPGASNNSG DNGSPKAPRP VDEPRTPNPG NTMSEQLGDK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle