YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75188866
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRFVWKPD LMFKTTLCAL LITASCSTFA APQQINDIVH RTITPLIEQQ KIPGMAVAVI  60
   61 YQGKPYYFTW GYADIAKKQP VTQQTLFELG SVSKTFTGVL GGDAIARGEI KLSDPTTKYW 120
  121 PELTAKQWNG ITLLHLATYT AGGLPLQVPD EVKSSSDLLR FYQNWQPAWA PGTQRLYANS 180
  181 SIGLFGALAV KPSGLSFEQA MQTRVFQPLK LNHTWINVPP PEEKNYAWGY REGKAVHVSP 240
  241 GVLDAEAYGV KSTIEDMARW VRSNMNPRDI NDKTLQQGIQ LAQSRYWQTG DMYQGLGWEM 300
  301 LDWPVNPDSI INGSGNKIAL AAHPVKAITP PTPAVRASWV HKTGATGGFG SYVAFIPEKE 360
  361 LGIVMLANKN YPNPARVAAA WQILNALQ

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	388	0.99