YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75229590
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLMIKFSAT LLATLIAASV NAATVDLRIM ETTDLHSNMM DFDYYKDTAT EKFGLVRTAS  60
   61 LINDARNEVK NSVLVDNGDL IQGSPLADYM SAKGLKAGDI HPVYKALNTL DYTVGTLGNH 120
  121 EFNYGLDYLK NALAGAKFPY VNANVIDART KQPMFTPYLI KDTEVVDKDG KKQTLKIGYI 180
  181 GVVPPQIMGW DKANLSGKVT VNDITETVRK YVPEMREKGA DLVVVLAHSG LSADPYKVMA 240
  241 ENSVYYLSEI PGVDAIMFGH AHAVFPSKDF ADIEGADIAK GTLNGVPAVM PGMWGDHLGV 300
  301 VDLQLSNDSG KWQVTQAKAE ARPIYDIANK KSLAAEDSKL VETLKADHDA TRQFVSKPIG 360
  361 KSADNMYSYL ALVQDDPTVQ VVNNAQKAYV EHYIQGDPDL AKLPVLSAAA PFKVGGRKND 420
  421 PASYVEVEKG QLTFRNAADL YLYPNTLIVV KASGKEVKEW LECSAGQFNQ IDPNSTKPQS 480
  481 LINWDGFRTY NFDVIDGVNY QIDVTQPARY DGECQMINAN AERIKNLTFN GKPIDPNAMF 540
  541 LVATNNYRAY GGKFAGTGDS HIAFASPDEN RSVLAAWIAD ESKRAGEIHP AADNNWRLAP 600
  601 IAGDKKLDIR FETSPSDKAA AFIKEKGQYP MNKVATDDIG FAIYQVDLSK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle