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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75238436
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQGGQIASM RIRMFSQIAN IMLYCLFIFF WILVGLILWV KISWQTFVNG CIYWWCTTLE  60
   61 GMRDLIKSQP VYEIQYYGKT FRMNAAQVLH DKYMIWCGEQ LWSAFVLATV VALVICLITF 120
  121 FVVSWILGRQ GKQQSENEVT GGRQLTDNPK DVARMLKKDG KDSDIRIGDL PIIRDSEIQN 180
  181 FCLHGTVGAG KSEVIRRLAN YARQRGDMVV IYDRSGEFVK SYYDPSIDKI LNPLDARCAA 240
  241 WDLWKECLTQ PDFDNTANTL IPMGTKEDPF WQGSGRTIFA EAAYLMRNDP NRSYSKLVDT 300
  301 LLSIKIEKLR TFLRNSPAAN LVEEKIEKTA ISIRAVLTNY VKAIRYLQGI EHNGDPFTIR 360
  361 DWMRGVREDQ KNGWLFISSN ADTHASLKPV ISMWLSIAIR GLLAMGENRN RRVWFFCDEL 420
  421 PTLHKLPDLV EILPEARKFG GCYVFGIQSY AQLEDIYGEK AAATLFDVMN TRAFFRSPSH 480
  481 KIAEFAAGEI GEKEHLKASE QYSYGADPVR DGVSTGKDME RQTLVSYSDI QSLPDLTCYV 540
  541 TLPGPYPAVK LSLKYQARPK VAPEFIPRDI NPEMENRLSA VLAAREAEGR QMASLFEPEV 600
  601 ASGEDVTQAE QPQQPVSSVI NDKKSDAGVS VPAGGIEQEL KMKPEEEMEQ QLPPGISESG 660
  661 EVVDMAAYEA WQQENHPDIQ QHMQRREEVN INVHRERGED VEPGDDF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle