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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125974406, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLKKQNNK REIQNEEDKI TLCHREKGCI NYFPLSYFQQ GLWFINQLDP NNSSYNIPLA  60
   61 YRLVGTLNKE ALKKSLEIII NRHEVLRTTF QEINGEPFQV ISPYSKVELN IIDISHITGE 120
  121 DCEKLALESA RNEANRLFDL TKGPLIRFLL ICKSQTEHIF VVTVHHIIFD GWSTGIFCNE 180
  181 LSEIYNALIS GREYNLPQLE VQYADYVVWQ HKKLNNEVIE KQLTYWRQKL TGNVQVIELP 240
  241 TDRPRPSIKT VRGGALPFEL SPALSKEIKI LTVRKRCTLF MTLLAAFKTL LYRYTCQDNI 300
  301 TVGTPIGNRS QLDCEKLMGL FINTLVLCTK TGDDPSFSDL LERVRNVTLE AYENQDIPFQ 360
  361 KLVEELKPER DLSRNVFYQV MFNFSDMSKV CMRLEGLEVS PFELGGSTAN VDLQLYVWQE 420
  421 GEVIKGYFEY NKDLFDESTI KRLIEQYKVL LQGVVNDPER HLSELPILPL EEKNKVLYEW 480
  481 NDNDVAYPHI NGLHKFFERQ VEKTPDSPAV FFENEYCTYQ ELNERANQLA HYLINIGAKK 540
  541 NTAIGLFLDR SIDMIVGMFG IMKSGAAYVP LDIKYPSDRI AAILKEAGIK ILITQDDLLS 600
  601 DVPQMEGLNV ICIDREQKKI CSFSKENPSV EVSNNDLLYI LFTSGTTGKP KGVLVEHRCY 660
  661 INYIQGIIRK LEIDSPLNFA IVSSFAADLG TTNIFIPLFT GGQLHILSYE RATDPEKFLD 720
  721 YFRKHKIDAM KLVPSHFEAL KTVQNFEDII PGKRLVFAGE ACSWELIEEV RRLNPSCMIQ 780
  781 NHYGPTETTV SALAYLVPDE LPQHAGSVVP IGRPLPNVKA YVLDKHRQPV PIGVVGELYI 840
  841 GGAGVARGYI NEPEMTKQKF IPNPFHPGPS SYMYRTGDLV RYLPDGNIEF LGRIDRQIKI 900
  901 RGYRIDPEEI EHAIKEHSVV RDAVVTVRGN SEKSNKLVAY LVLDKKAEGN LDISEIRRYL 960
  961 KKKLPEYMRP SSFTVLDSIP LNTNGKVDYK SLPEPSEDII EDDNYVAPRN ELEEKIASIW1020
 1021 KETLEISRVG IDDNFFDLGG ESFKAMSVVR KISPSLSVID LFKYPTIREL SDYISNKQKE1080
 1081 EKREILHELT KHVSKEKKQM NLICIPYGGG SAVAYQPLAN EIPENWSLYA VQIPGRDFSR1140
 1141 PHEKPESLEK VAEMCISEIK EKVTGPIVLY GQCVGGALAI KLAYMMEEQG MELVGVIEAG1200
 1201 NFPSPRLPGK WFELWSKIFP RDRWISNRLY KEILKSIGAP IGGSNNEAEQ DFIIRSLRHD1260
 1261 SREAEDYYTK MFSTENLKKL KAPITCVVGE RDRTTEFYQE RYKEWEHFSN CVNLRVIENA1320
 1321 GHFFQKHQAD ILAQIIVDQV EKWKNIRSSE FVEEALEETV DKKKVKTSIF DKANVKPSMK1380
 1381 LFLFIALGQI VSMFGTSLTG FALGYWIYKE TGSVSYYTLI SVCTLLPNIL ISPIAGAVAD1440
 1441 RWDRRKIMII SDTFAAMGTL AIALLLWSGR LEIWHIYIST TISSIAGAFQ RPAFLAAIAQ1500
 1501 ITPKQYLGQA NGIAQMGSAS GSMLAPIIGG MLASSINLYG ILLIDFISFL FSVVPLLLVA1560
 1561 FPNYMFKKRE EPFIEEIKGG WNYIIKRKCL IIMIGFFIVT NFFMSLSTVL VTPVVLAFAS1620
 1621 VETMGIVTSA NGFGLIVGSI IMSLWGGTKR RADGMIGYVI LSGICLILIG IRPSVVLATI1680
 1681 GLFGFGLSIA FIDTHWQILI QSKVGLELQA RVFSINEMLA FIMRPLAFFL AGPLSDKVFE1740
 1741 PFMAGEGNLA TKISMIIGSG EGRGMGLILV LSGIILTIWG IMGFNYRPLR FMEDVLPDAI1800
 1801 PDPVILKDKN KIQELADMQL LKTIQNDRKR AKI

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