YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83585283
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLKISKTL LAVMLTSAVA TGSAYAENNA QTTNESAGQK VDSSMNKVGN FMDDSAITAK  60
   61 VKAALVDHDN IKSTDISVKT DQKVVTLSGF VESQAQAEEA VKVAKGVEGV TSVSDKLHVR 120
  121 DAKEGSVKGY AGDTATTSEI KAKLLADDIV PSRHVKVETT DGVVQLSGTV DSQAQSDRAE 180
  181 SIAKAVDGVK SVKNDLKTK

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	199	0.99