YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75188438
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISSGISLIS LWHTYADEHY RVIWPRDKKK PLIANSWVAV YTVQGCGKIL LKNGEQITLH  60
   61 GNCIIFLKPM DIHSYHCEGL VWEQYWMEFT PTSMMDIPVG QQSVIYNGEI YNQELTEVAE 120
  121 LITSPEAIKN NLAVAFLTKI IYQWICLMYA DGKKDPQRRQ IEKLIATLHA SLQQRWSVAD 180
  181 MAATIPCSEA WLRRLFLRYT GKTPKEYYLD ARLDLALSLL KQQGNSVGEV ADTLNFFDSF 240
  241 HFSKAFKHKF GYAPSAVLKN TDQHPTDASP HN

Type	Start	End	Confidence
Signal Peptide	1	16	0.79
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	272	0.99