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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sp|P37645|YHJG_ECOLI
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKAGKITAA ISGAFLLLIV VAIILIATFD WNRLKPTINQ KVSAELNRPF AIRGDLGVVW  60
   61 ERQKQETGWR SWVPWPHVHA EDIILGNPPD IPEVTMVHLP RVEATLAPLA LLTKTVWLPW 120
  121 IKLEKPDARL IRLSEKNNNW TFNLANDDNK DANAKPSAWS FRLDNILFDQ GRIAIDDKVS 180
  181 KADLEIFVDP LGKPLPFSEV TGSKGKADKE KVGDYVFGLK AQGRYNGEPL TGTGKIGGML 240
  241 ALRGEGTPFP VQADFRSGNT RVAFDGVVND PMKMGGVDLR LKFSGDSLGD LYELTGVLLP 300
  301 DTPPFETDGR LVAKIDTEKS SVFDYRGFNG RIGDSDIHGS LVYTTGKPRP KLEGDVESRQ 360
  361 LRLADLGPLI GVDSGKGAEK SKRSEQKKGE KSVQPAGKVL PYDRFETDKW DVMDADVRFK 420
  421 GRRIEHGSSL PISDLSTHII LKNADLRLQP LKFGMAGGSI AANIHLEGDK KPMQGRADIQ 480
  481 ARRLKLKELM PDVELMQKTL GEMNGDAELR GSGNSVAALL GNSNGNLKLL MNDGLVSRNL 540
  541 MEIVGLNVGN YIVGAIFGDD EVRVNCAAAN LNIANGVARP QIFAFDTENA LINVTGTASF 600
  601 ASEQLDLTID PESKGIRIIT LRSPLYVRGT FKNPQAGVKA GPLIARGAVA AALATLVTPA 660
  661 AALLALISPS EGEANQCRTI LSQMKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle