YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KAD_ACTSZ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIILLGAPG AGKGTQAQFI MNKFGIPQIS TGDMLRAAIK AGTELGKQAK TLMDAGQLVP  60
   61 DDLIIALVQD RVAQPDCEKG FLLDGFPRTI PQADALKAAG IGIDYVLEFD VADEVIVERM 120
  121 SGRRVHPASG RSYHVVYNPP KVEGKDDVTG EDLIIRADDK PETVLDRLKV YHTTTRPLVD 180
  181 YYQAEAKAGN TRYFRLDGTQ PVEAVSRELD KILA

Type	Start	End	Confidence
Signal Peptide	1	17	0.87
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	214	0.99