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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67931601, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWTGWARLC TALIVSCVAP RPAPAAESST GSLRLGIRTL PLIDKQDIRF VRVAAEGESL  60
   61 ESRVTSIAQD RYGFLWFGSD DGLYRYDGYK LKSFRREPGN PNSLSDDTVT AIYRDRTGIL 120
  121 WVGTGFGGLN RFDPASGTFT HYRHDPSNRG SLSSNAARCI FQDAAGALWV GTANGLDRLD 180
  181 QTTGSFAHYQ HNKQDAGSLS SNEAVDIFED RSGNLWVGTI GGGLNILDRS TGRFTRFRES 240
  241 YTAASPGDDS SALLSSIRQD HAGLLWVGNG LGTLDPRTGT LTRYAFRSKD PGGEIIKGLR 300
  301 ALQEGREGEL WLGMQNGLLL LDRERKQFAR YLKKPANPQS LHNDDILSLF QDAEGNIWVG 360
  361 TQSGVSRFNP RPLFTIRQHE PGNSQSLVEN NIRAVQVDRQ GNLWVGTRRG LQRFEPKTGR 420
  421 ATLYQHDPHD PSSISNNYVT VIREDRSGVL WVGTGGGGLN RFDGTRGRFF AYRYQPGNPA 480
  481 GLSSDGVLSL LEDREGMLWV ATAAGLSRLN RRTGRFTTYH HDDSDPHSLS DDLIKTVFED 540
  541 RDGTLWVGTK GGLNRFDRAS QHFTSWQHNA HDASSLSHDQ VNAISEDRKG RLWLATQEGL 600
  601 DQMDRSRGTF TTFTREDGLP DNAVQSILED DHGSLWLATH NGLARFRPAS GTFRNYSAAD 660
  661 GLPGNLLNPL GTESSCRGPD GQLWFGSRNG LVSFYPDRLA DNPYVPPVTL TDFRLFNKTV 720
  721 HPGPNSPLQQ PIWATRSLTL TQAQGIFSLE FAALSNTAPE SNRYRFMLEG LETEWNEVSS 780
  781 RQRLATYTNL PAGNYVFRVQ GSNNNQVWNQ EGVSLAIVVL APWWATWWFR STVGLVIAGM 840
  841 AFGAYQSRVR ILRLGAARLE RQVSERTSEL LERTGELQIA KDAAEAANRA KTIFLANMSH 900
  901 ELRTPLNAIL GFSNLLREGD VSEWQRNDLD IINRSGEHLL SLVDEVLDVA KIEAGRGVLE 960
  961 IAPYDLAGMV RDVMDMMGAR AQMKGLALLH ADSSGLPRYV RADGPRLRQV LINLVGNAIK1020
 1021 FTPSGSVTLR LDAGCVDDDG RFSLTFYVED TGCGVAPEDH ERIFEPFVQV GPAATKKGSG1080
 1081 LGLAITRQLV EMMGGTVSVE STPGKGSRFR VEVPVYAHED AGPLGERTER GRITGLEPGQ1140
 1141 PEFRVLVCED EPTSAAVLLR FLQSAGFQVK VADNGAKGVD LFQTWRPDFI WMDLRMPVMN1200
 1201 GAEAAKRIRA VEGGRAVKIA GVSASAFAEE RSEVLAAGMD DFVRKPFRAA EIFDCMARHL1260
 1261 GVRYCRSESQ PCTRQESPPP LRAEALAGLP QELRAELQDA LAALDVERIS AVVVRVTERD1320
 1321 FGLGSTLSHY ADRLEYTAIF QAIENCQAPE VFAKGSTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle