YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85825936, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEMLREYLP ILVFLVVAVG LGIVLILAAV VLAVRNPDPE KVSAYECGFN AFDDARMKFD  60
   61 VRFYLVSILF IIFDLEIAFL FPWAVGFKDM SDTGFWSMMV FLGVLTIGFA YEWKKGALEW 120
  121 E

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.61
Transmembrane Helix	9	34	0.87
Cytoplasmic	35	62	0.62
Transmembrane Helix	63	85	0.91
Non-Cytoplasmic	86	92	0.58
Transmembrane Helix	93	113	0.91
Cytoplasmic	114	121	0.63