YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|218544716, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKFYSVLT LSLALQTVLA PTYSFAESAE KSAEVYTEDQ VFKSIKEHVN EHSTHEEDIE  60
   61 VTGQFLLYTS KKHSLYTAND LKNKSNIEIT EQVVTATKKK GNAYYITTST GAGWIDNNDN 120
  121 SLEVQEIHKL SNQKLIVKEE ASIHALPFQS FNEEGKLQPQ VITPTEQAGN WFKVQINETA 180
  181 KWIYAPSATF EGTKASLLKN VRSAKNSLLR APDALQTNNI YGVTFKEMIV PKGNDDIRPG 240
  241 YPMVPKYITI HETANTAKGA NALNHAKFLD NQARGTADRA ASWHFTVDDK EIYQHLPVNE 300
  301 VGWHAGNKTG NYESIGIEIA VNQDGNYEKA VENARKLAAY LMNDLNISLD KVQKHQFWSG 360
  361 KNCPAFMIQR GQWNAFLKGT ETYYKENQKD PVTDDITGGW YEQDIRQLAA RGIMQGEGNG 420
  421 KYFPERLVTR AEFATLITRA LQLPSGNAKF TDLEQVHPSL RDGINRAASA GIIRGRGDNT 480
  481 FDPNTTITRE EAVIMIDRSL KHAGIFAKQV ELPFVDQNLI YAKQEVQRVY GFGIVKGNEF 540
  541 NQFVPKGPSQ RAHAAAFINR MLSVIEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle