YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74492017, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEELMEETIS LKELFHIFKK RLAMILVIAF GAAIVSAIIS FFFMTPIYQS STQILVNQKK  60
   61 QEGAMFQAGE IQTNIQLTNT YKVIIKSPVI LEQVNEKLNL NMTAQELTKK VNVANEKDSQ 120
  121 VIAVTAEDKD PKIARDIANA TADVFKGEVA KIMNVDNVTV ISKAEVAENQ SPIKPAPMLN 180
  181 IAIAFIVGLM ASVGLAFLLE YLDNTVKKEE DVENLLGLPV LGIVARMDEE TLNVKSHAPS 240
  241 SRKVRGQTIG S

Type	Start	End	Confidence
Cytoplasmic	1	20	0.98
Transmembrane Helix	21	44	0.92
Non-Cytoplasmic	45	177	0.97
Transmembrane Helix	178	199	0.81
Cytoplasmic	200	251	0.84