YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|228901215, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIYLVTII CAFIVISIFV FQKINEHKYT KAINQSNHIK NIAHRGASAY APEHTIAAYK  60
   61 LGQQMNGDYI EIDLQMTKDG HLVAMHDETL NRTTNGTGLV KEHTLEEIKQ LNAGSFFNEK 120
  121 YPNLAKKEFE NAKVPTLKEI IETFGHNANY YIETKSPDEY LGMEEKLLEI INYYEIQDKV 180
  181 IIQSFSEESL QKIHSLNSNI SIVQLLPYKK AVQLTKLEIE KYKMYCIGLG MNYKYIDSDY 240
  241 VKKIKKSGLE VHPFTVDNEN DMKKLLAWGV DGMFTNYPDH LHSILDLKNY E

Type	Start	End	Confidence
Signal Peptide	1	22	0.69
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	291	0.95