YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85835839, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANTFSLILV IVTLVTGIVW ALEKFVWAKK RQQKLADVEA QSNGLDAATS AKDTAQPWWV  60
   61 ENSVSIFPVI AFVLVLRSFI YEPFQIPSGS MMPTLLVGDF ILVEKYAYGL KDPVWRTQLV 120
  121 ETGKPERGDS IVFKYPPQPN IDYIKRVIGM PGDTIRYSSN KEICIQAKGG SSCKPVKLSN 180
  181 VEESQFIQDG VPLIQLNEQL GDVEHQILVN PLRRDRVQAY QPRNGVNEWI VPEGQYFVMG 240
  241 DNRDNSADSR YWGFVPEANL VGKAVAIWIS FEFERGSDSV LPTWIPTGVR FNRIGGIH

Type	Start	End	Confidence
Signal Peptide	1	21	0.86
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	298	0.93