YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|116189055
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADKKATLHI EGKAPIELPI MDGSLGPQVI DVRTLGSNGY FTFDPGFLAT ASCESQITYI  60
   61 DGAKGILLHR GYPIDQLANN ADYLEVCYIL LYGEAPNRKQ YEEFKKIVTR HTMVHEQIAS 120
  121 FFHGFRRDAH PMAVMCGVVG ALAAFYHDSL DINNDTHREI AAYRLLSKMP TLAAMCYKYS 180
  181 VGQPFIYPRN DLSYAENFLH MMFATPCEEY EVNPIVARAM DKIFTLHADH EQNASTSTVR 240
  241 LAGSSGANPF ACIAAGIASL WGPAHGGANE ACLRMLEEIG SVDKIPEYVR RAKDKDDPFR 300
  301 LMGFGHRVYK NYDPRATVMR EACHEVLKEL SIQDPLLDVA MELERIALSD EYFIEKKLYP 360
  361 NVDFYSGIIL KAIGIPVSMF TVIFAMSRTI GWIAHWNEMH SDPDNRIGRP RQLYTGQKLR 420
  421 DFTPLHERS

Type	Start	End	Confidence
Non-Cytoplasmic	1	367	0.61
Transmembrane Helix	368	391	0.67
Cytoplasmic	392	429	0.54