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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|86196445, gi|...
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSVQEILD VPREFVKDGI QFLNRCQKPD KKEFRQICQA VGVGFLIMGA VGYIVKLVHI  60
   61 PLNNILGEKG AGIGVWLEEL VRREDPSIFG PPGRTRPRTP PDPDRFPKVP SEKGTELMDS 120
  121 GLFGVTPAAV PSSTKYSSPQ AEVALRLLDR ELGLRDPIDQ RMDQRILAQT MIPSDPADML 180
  181 IRFPQSVYSG QFSDDGNFFY AVGKDFKVRM YDTSNPYNWR YYKTARFPFG QWTLSDASLS 240
  241 PDNRWLAITS LLPHVCLAPT DPNDSGDPYT LDLSNTGLTG REQGAYWRDA RHFAIFSVRY 300
  301 SGDSRELVAG TNRNSVIVYD IESRTVLHNV VGHNDDVNAV CFADKSSPHI LYSGSDDTTI 360
  361 KVWDRRSMAD RRAAGAFVGH IEGLTYIDSK NDGRYLLSNG KDHSMKLWDL RMAMSEPDFS 420
  421 SKDPTRCTRN RTTDYRWTEL RDDDWFPHPH DNSVVTFRGH RVTRTLIRCH FSPPGSTNSR 480
  481 YVYSGSFDGK VYIWNLDATL AGTIDVGAES QRILGRANAR PSPPYRHLRD HGYTAACIRE 540
  541 AHWHPKAPMV VASAWGGDNT DSGFCSVHSF NDGLEDEGIE MGRLLNERLE PSQPADSKTG 600
  601 G

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle