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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|151938911, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPAELKRLY HIAKVQLEYG LDELLPDHQL TKAPLLLRKS LFWIKNKHPE KPLGERLRLA  60
   61 LQELGPVWIK FGQMMSTRRD LFPPHIADPL ALLQDQVAPF DGELAKKQME QALGGPLENW 120
  121 FTEFDIKPLA SASIAQVHTA RLKDSNQEVV LKVIRPDIRP VIDSDLKLMH RMARIVAGAM 180
  181 PEARRLKPVE VVREYEKTLL DELDLRREAA NAIQLRRNFE GSEELYVPEV FPDFSNETVM 240
  241 VSERIYGIQV SDIDGLKANG TNMKLLAERG VSVFFTQVFR DSFFHADMHP GNVFVKPEHP 300
  301 ENPMWIGLDC GIVGTLNSED KRYLAENFLA FFNRDYRRVA ELHVDSGWVP ADTNVDEFEF 360
  361 AIRIVCEPIF AKPLCEISFG HVLLNLFNTA RRFNMEVQPQ LVLLQKTLLY VEGLGRQLYP 420
  421 QLDLWETAKP FLEEWMMNQV GPQALVNAIK DRAPFWAEKL PELPELLYDS LKQGKAMNQR 480
  481 MDQLYQGYRQ SKRQQATGKF LFGVGATLVV CSAILVNNAF EQLSLASGIA GVTFWLLSWR 540
  541 AYRQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle