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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|87249128, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIIKSIGD LRVSVVLFLL FALFCALATF IESAYGTPTA WAMVYDTFWF EYIQLLLGIN  60
   61 LLCGMFRYKM FGLKKLPLMI FHISFLFILV GSAMTRYAGF EGILPIREHT QNSLIESSKT 120
  121 SLRISAIKDG ERYSAVNDRY IGNLPFANSF KLKLNLGDDQ AVLKYKDLIL NAHYTYKENN 180
  181 NSDPLLVLML SQKGSQGVDV KFEKGEVKNI EGVNFAFMND NVKAPFVKID ENLTLSSSEN 240
  241 LHFLSMLDGQ NLDLKIGEKA NAKERRLYEI KDISFVVKAA SLHAQEALEG SNRPQDESFW 300
  301 LWFKSAWLEV GRTMLISTFG EPQNWKNSLL LHFKDFALSN ENKNLELTGS NALKLELSYK 360
  361 NESKEFYIFE YNKPIMIELA GQKFFISWAL SYEQLPFDIY LRDFVLDRYP GSMSPASYAS 420
  421 EITVKNNNEN FDYRIFMNNV LDYDGYRFYQ SSYDQDEKGT VLSVNKDPGK IPTYIGYFLL 480
  481 CLGMFMNFLN PHSRFRTLAR LINKDTLKHT SVIISILLLS FGSEKTFAQD LNSTLPVVNT 540
  541 NHAKALATLI VQKSADGRMV PFDTLSREIL EKIHQSDSYK GQNSNAVMLS MLVDVDKWQM 600
  601 EPFILMPQNQ AVRDAIANIL EIPSAKYISY KDFFDENNRY KLQKYVENAN RKNPNARGVF 660
  661 DKEIIKLDER ANVVNLVFSG ELFKFIPVQN NPNNVWLAPF SAVTTLKGDE GHIVLALIQN 720
  721 YFSAVENAFK DGNWTRADEG LKFIKEYQEK IGYKVMPSKT KVEMEIFSNK AEIFVKLAPV 780
  781 YLIAGFLLLI LVFSKMVVPN LKISFIFKVV YVLNVLAFVI HTVGLGLRAY LSGHAPWSNG 840
  841 YESMVYIAWA LSLSGIFFSR KSPIALSLTS ILSGVVLMVA HLSEMNPQIT NLVPVLNSYW 900
  901 LSIHVSVITA SYGFLGLCAL LGIFTLFLMC FLKKDGKYNL NILRNITEAT RINEMAMIFG 960
  961 LCLLTVGNFL GAIWANESWG RYWSWDSKET WALVSILVYA AILHLRMIPK YCNQFVFALW1020
 1021 SMFAYWVIIM TYFGVNYFLT GLHSYAAGEA AQIPNYVYWG FALMVVLALF ARRKRNFVGK1080
 1081 L

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