YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76587214, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKSKILFLL LTFILPVALI AGCSTGNTNN TSNAKEEKTI GLVISTLNNP FFVTLKDGAE  60
   61 AKAKELGYKL IVADSQNDSS KELSNVEDLI QQKVDVLLIN PVDSDAVVNA IKEANSKNIP 120
  121 VITLDRSANG GDVICHIASD NVKGGEMAAE FIAKTLNGKG NVVELEGIPG TSAARDRGKG 180
  181 FDEAIAKYPD IKIIAKQAAD FDRSKGLSVM ENILQAQPKI DAVFAQNDEM ALGAIKAIES 240
  241 ANRQGILVVG FDGTDDALKA IKDGKMAATI AQQPALIGSL GVEMADKYLK GEKVEKFIPA 300
  301 ELKLITK

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	307	0.99