YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|88178435, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRGLSRP ARSLHLSQLS RQTCTAGSIR CASSEAGLKD LEDSTLTAPQ LSHEEKKEFR  60
   61 PWKRAADRKV ALPSGRYQYH PPKYNRGPLH PVQSPPSSDP IARDFVPGPF NLPRLKQTYH 120
  121 STIASDIMTL AYTHVPPGTP KKETPERLRG WDGSSPYHKN RALRGPRGNP VLPLLERDVT 180
  181 FNNIPEIKEV TIAIYVPDAI KEPDHLLVAR SVLLSLTGTT PEITKTKSNV VQWGIKIGDR 240
  241 AGVKSTVYGN AAYEFLDRCV HLVFPRIKDW RGIRATTGDS SGNLSFGMSP DEVKLFPEVE 300
  301 ANYWMYPAKM LPGCRVFIKT TATSDRQARL LLQSFGVPFY GEVRN

Type	Start	End	Confidence
Signal Peptide	1	26	0.61
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	345	0.99