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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88183696, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAESHHLNEE PSRGTQHGRR ASATSGGYNA PGSTHDLDSP DGARTSLNRP HPQNASGIPL  60
   61 KHERNPRHSR RASMTSHPGY DVPDTYTNLD ETADVSPIQN PHEEPIHRFR SLEQTRAQEQ 120
  121 EFVQEQKRHR QPPEPKKLEE AKYDVSRLLT QLYTISYLIL FSILGTLARL GLQALTNYPG 180
  181 TPVIFTSIWP NFAGCLVMGF LSEDRMLFRE AQPPTPSPPS HYTLASPLAS AGSLTSFSAF 240
  241 IRDTFPRAGQ RPPHQAHPLH YPPETAATAS SRSSPSPLIT LALSLSALFL GAHLAIALAP 300
  301 IMPSLHRTPH AWADRAAVPL AWGCWLGAVL LAALPPAGHA AWRGEVLFAL VFAPLGCLVR 360
  361 FVVSLWLNGR VAAFPVGTFV VNVVGTAVLA AAWDLAHSGA VGGGAGEGVG VRVTVGCQVL 420
  421 AGVQDGFCGC LTTVSTWVGE LAALRRRHAY VYGGASVLGG LAVVVAVMGG LRWSEGYESG 480
  481 ACGCWVKVQP VTPRVLLIPV SAKPERFRRV LPVLLVTNQT SQSADVFARF CRARGLPTIY 540
  541 VCGSDQYGTA TETKALSEGV DPATLCAKYH AIHKDIYDWF RLDFDVFGRT PTDEHTAIVQ 600
  601 DIFTRLWNNG YIEQRETTQA YCPTHSSFLA DRYVEGECSL CHDKGARGDQ CDACGNLLDP 660
  661 LEPERDASGN QETKATGWLI NPRCKLDGTA PEKRQTKHLY LRLDALQGEI EEWLKTVEKA 720
  721 WSANCVSITH SWLDQGLKPR GITRDLKWGV PIPTGLDGLS DEDYAKKVFY VWFHTIIFPA 780
  781 SQLGTKENWT KIKAVSTCEY LNYEGGKFSK SKGVGVFGTN ARDTGIDADI WRYYLLSRRP 840
  841 ETSDSEFKWE EFVDANNNDL LKNLGNLCQR IIKFCQAKMD GVVPEYDLSK FPALQQHREE 900
  901 VEKLLQDYVA HLKAVKLRAG LSIVMNISGL GNKLLQDNKL SNQLIAEEPE RCRAVIGIAL 960
  961 NHIHLVAHLL SPYMPEKSQS ILRQLGVKGP GGDGQDIPAQ IPDTWEANDL KPGHAVGEPE1020
 1021 LLFANIPAAK IEEWREAFGG EELRKQKEIE AEKAAAKKAA REKEKEKRKL KKAAQAAQAA1080
 1081 QAAEAGQGPT STLPIHPGPP AQAAAKSNEP AEPPVQN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle