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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|88184866, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDYAASFLN VIEEAANPES EGHEDEGQHE VETADTADAT VDAADAESAK KGRRGLRNGI  60
   61 FRAANIQDKL LEKLVSQVMP AEEGRGHVPD ISGDDIPFAK RPGFSLPLMT TNFRRFNARI 120
  121 GVVFKFQARA FRLLSWRRPT HTLSFLAVYT FVCLDPYLLF ALPLAISLFG ILVPSFIARH 180
  181 PAPTPDADRV RNMSYSPRGP PLAPARTVKP TKELSHDFFR NMGDLQNVME DFSVAHDKIV 240
  241 ALVVPKTNFS DEALSSAVFV LLFAGCLIML IAAHLLPLRA LALVGGWAAI WSGHPTVARL 300
  301 LQQAKLQYLD APPSPASAAD PVHHQHQQHQ DPTKPPPPNN KKHPLLTNPT QTLQTLITQD 360
  361 IHLDTSPETR EVEIFELQRQ DLPTTTGPPS SSPSPTPGHP TSSTYPNEWQ PWLFSPSPYD 420
  421 PLSAARLANE RPRGARFFED VLPPPGWVWS EKKWALDLWS REWVEERIIT GVEVETEGER 480
  481 WVYDMWSERD AGGGSGGHGG GGGGGNGGLE AGEGDAVVVR DQQQQRNRER MGTPGLSWEE 540
  541 GEEGMGRRGQ WRRRRWVRLV KRKGVTASG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle