YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|89333413, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIQKSWPKA LFWALTALLA IGLTGCGAAP GSPSGNKKTN GSDKTVNIGY VNWAEAVAVS  60
   61 NLWKVILEEQ GYKVKMTSLD AAPLFVGLSA GNLDIFMDSW LPTTHQIFWD KYKNKLDDYG 120
  121 VWYTAEAKIG LVVPEYAEIS SIEELNAHKD RLSGRITGID PGAGIMKATE TAIDSYNLDF 180
  181 NLIQSSEAAM LAALDKAYRN QEWIAVTGWS PHWKFAKYDL KYLEDPKGSY GQSEQIHTLA 240
  241 NKEFTQAHPE VAAMLKKFEL NDQQIGTLEG YINEGMKPEE AAQKWMAENR DLVDSWLK

Type	Start	End	Confidence
Signal Peptide	1	28	0.99
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	298	0.99