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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68199765, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGAELEVVE DHRLVDAEER EQQRGGDPGP VLAGRAVEQG RRRVRLGEPG EEAAERRCAR  60
   61 LGHRVVDARE KVRRHLCQPA RDDEIGQLPG PRRAAADGEP LAPDPAGQQR RRPLDLGLGP 120
  121 QVVDDPQAEL LDGGQVGGGE AVQRRRPVDP APAHPAPARG RVAAQVTDVD GALEAHQPHP 180
  181 APARPALARP GLGLGRHCRS MRAATSRDIR RTSLFMSGTV FRRPARGLAA VPQSRSRAPT 240
  241 CVFGDHHIVL TWVPSYSAWH MTARGAAVPE PARGSNPVSA ISVGQAVLLG IVEGVTEFLP 300
  301 VSSTGHLKIA EGLMDIPVDD RSVVAFTAVI QVGAIAAVLL YFFADIRRFV GAFANGLVDR 360
  361 EARQRHDFKF ASWVFYATLP VVAVGLAAKS LIDGPLASLW VVAGSLLAGS AVMWFADRFG 420
  421 RRKRGEDDID LTDAMAVGSS QILALLFPGF SRSGATMSTA LVRDLDRVAA TRLSFFLSIP 480
  481 ALTGAGLYEL KDAVGGGVSV LPLAVGTLVS FVVAYASIAW LLRYVARHSF DLFVGYRVAV 540
  541 AVILIGLLAT GTLTT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle