YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPF_SHEDO
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFNATLIGQ SVAFLIFVWF CMKFVWPPLM NAIEERQKRI ADGLADADRA VKDLELARSK  60
   61 ATDQLKEAKA TANEIIEQAN KRKAQIVDEA KAEADAERAK IIAQGKAEIE AERNRVKEDL 120
  121 RKQVATLAIL GAEKILERSI DPAAHSDIVN KLVAEI

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.76
Transmembrane Helix	7	27	0.88
Cytoplasmic	28	156	0.78