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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68540985, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.75
Topology Confidence: 0.26
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGENLSQLI HKLVLGALCI LSLWGISCNG LAQPLSAAFT QLKFEHIRSE DGLNQNTITS  60
   61 LFMDSAGMLW IGTQDGLHAY NGHNFTIFTH SPNDPSSISE SYVSDIIQDS EGYIWVSTFS 120
  121 QGVNRLDLST GTFEHFGQEQ GLTDPRTTKL SIVGNTLWIG TKAGLFSLST KTKRITQVSL 180
  181 GNSVEPYITS LANVENTYLL AGTQDSGTFA VSANTITRLN VPQNVTTYQI RANSAYSITL 240
  241 ALGGQLWHYN LASQQGEILW QTDDNVPYIK DFIQTEQGDF WVVGPEAGLI QLEKNDNLFT 300
  301 ATYHRYDPKR TNSISENNIL SLLQDPFGNL WLGASYSGLD KINTRRQYFQ HIFEYTTELS 360
  361 QQSNNIRTLF RSKDNVLWIG TEGAGLKRIL ADGKYEHYTE LFANALGMHQ RNLNLILRDI 420
  421 DQDKAGVLWF ATNYGLGRLS PEGDFQLLKV TTSTDQGSEA NYIRNLDIDD QGHLWVATTH 480
  481 AIYRKAIDTD EFTFISLANI DHFYPAQNQL LILRAHKDTL WIGTLNGLLK LDMKTGIGKS 540
  541 YFHQSSNKKS LINNRVRDIL VTQAGEVWFA THGGISKLSS QGADAGFTHY TREQGLPSDT 600
  601 IYALLEDQEH NIWFSSNAGI GKLNPKTNRI IIFNEQEGLQ ALEFNGGVKL QDSDGDLWFG 660
  661 GINGINRFNP QSIPDQRPDV KVALTGYSIA GKGHTILDLS RPPSIVMNYS DQLISFEVTS 720
  721 LDFSYTGKNR FSYYLEGFDN EWHELPTGNE ITFTNINSGH YRLHVRHGLQ YNSEGAYALL 780
  781 VDLNVQAPLY RTQFAYVLYF LLTLGLLAWV ILWRKKKHQI QREFETSIRA SEERLKLALW 840
  841 ASGDGMWDWN IPENQVYRTN MDSSIPHWNS SNIVHESMHS EDRERFKLEL NEHLQGRSPF 900
  901 FEAEYRVERS PGNWVWILDR GKVVEKDSLD NPIRMTGTNR NITSRKLIEN ELVLSSQVLN 960
  961 SMNEAVVVAG LDYRIRSVNP AFCAITGYTE RQITDRHFIH LAFGRQQREL FNTIEQQLLR1020
 1021 HKHWVGELWI RNKQRQAILV WLEINQVIDI KGETSHFVAV FTDITQRKKA EEDLRFLASF1080
 1081 DTLTGLPNRT LFQDRLNHAI TQAHRANNIV ALLFLDLDRF KHINDSMGHH VGDLLLKAVA1140
 1141 RRLQNAVRDG DTVARLGGDE FTIILEGVAK TKAATLISEK VLRAFQTPFL LDDKTLTIST1200
 1201 SIGISLYPND ADNADSLIKF ADTAMYHAKS SGRNNFQFYT SKLNEIATRH VQLESGLKEA1260
 1261 IQRNELSLVY QPKFCLKDGS LTGIEALLRW HHTELGPISP VEFIPLAEET GIITQIGHWV1320
 1321 INQACQQLAE WNSLGFNGIT VAVNLSARQL KADIISTIEV ALAVSGLPAQ SLELELTESM1380
 1381 IMGNPQESVS ILSKLKALGL TIAVDDFGTG YSSLSYLKRF PIDTLKIDRE FVRDITNDPD1440
 1441 DAAITSAIIA LAHSLDLNVV AEGVETQEQL NFLAMQGCDQ VQGFLLSKPL SAADFLTLLK1500
 1501 NQSKPQPI

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