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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|69942021, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLRVTFTAT HPLILALVLI QGLVIFLLSF PVLAQSDTEL NYEVKFEHFT DKYDLNQHSV  60
   61 TRLFRDKAGM LWVGTQDGLH SYNGIEFELF IKQNNKSNSI SGNFITDIIQ EPNGGLWVAT 120
  121 LNNGLNRLDL NSRKFTRFDK SHGLNDLRVT NLSIIGETLW IGTRTGLFLL SLNTHDITRV 180
  181 TLGQNSAPHI TSLTNIDDKY VIVGTEKRGT FAIDNNSIIR LDLPSEQTLY RAHASSIYSV 240
  241 WMAIDNQIWR YNLATQEKEF IWERKDQQGK AAHITDFVVS PAEQIWAIGP NSGLIELNIQ 300
  301 QSHWQSRVHK HQPRKLHSLT ENTIQSLLLD DDGTLWLGTG YSGIDKLNIN QHYFNHLYDY 360
  361 HSSQPRVANM IRALFRDAEG TFWIGTEGAG VKSIKQGQQR YHNQLFADAL GLKIEHLNLT 420
  421 VYEIIQDKQG QLWFATNYGL AKLHLGKLSF IPLDQTLADQ QIKLQSITLD NKGTLWAVSA 480
  481 ENLFSLQDGK LKIHELAPQG NINFEESNFR KVFYHNDILW LGSLTGLIRL NLKNHQITHY 540
  541 QAQPNKANSL SDNKVRDFLV TRDGDLWIST HGGANKVILD LNGDISFESI KANSDLVNRT 600
  601 TYAMLEDEQA NLWLSTNSGI ARYNPSKQVL TAFNEYEGLQ SSEFNGAVKW KDTDGTLWFG 660
  661 GINGINLFNP SQIPAQRPAI KLALTGYVLG DKHYRLLDLN QPPTIQLPFD KQLVSFEVSA 720
  721 LNFNYPELNR FSYFLVGVDN QWRERSSKNE ITYTNLAPGK YELLVRHALE HNDYSQSRLS 780
  781 VSVEVIPPIY RTTLAYIIYI LLGCIFILQA IHSRQKKQQK QNEFETSIKA SEERLKLALW 840
  841 ASGDGMWDWN IPDNQVFRTN MSNPQSLSRS KSTLINSIHP EDRPKVQLLL NEHIAGNSEF 900
  901 YEAEYRIRDE VGSWIWLLDR GKVVEKDTNG APIRMAGTHK DITSRKVIEN ELKLSSQVLY 960
  961 SMNEAVVVGE LDYRVRSVNP AFTRITGFEP DEVTNKHFLF LAISSQGRDF YNQVETQLLK1020
 1021 HKHWAGELKI RTRDKKGILA WLEINQVIDN KGETSHFVAV FTDITARKKA EEDLRILANF1080
 1081 DPLTHLPNRT LFQDRLDQAI TKAHRNQNIV ALFFLDLDRF KHINDSMGHH IGDLLLKAVA1140
 1141 HRLQRAVREG DTVARLGGDE FTIILEGVTK LNAVTLVAEK ILNAFQKPFL LDDKNLTISP1200
 1201 SIGISLYPDD ANDVSSLIKY ADTAMYHAKS VGRNNFQFYT DQLNQYATRH VQLEAGLKLA1260
 1261 IQENELSLVY QPKYDIFTKK IVGFEALLRW NNPSLGFISP AEFIPLAEET GFINQIGHWA1320
 1321 INQACNQLAQ WHELGFRDVS IAVNLSARQL KADIISTIEV ALAVSGLPAS ALELELTESM1380
 1381 IMGNPQDSVA ILSQLKSLGL TIAIDDFGTG YSSLSYLKRF PIDTLKIDRE FVRDITEDPD1440
 1441 DAAITSAIIA LAHSLDLNVI AEGVETPEQL DFLLNEGCDQ VQGFLLSKPL SAKDALALLK1500
 1501 KS

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