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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OPGH_SHEB5
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVSENSVLE TEVLVGGSAM PNERPGAMEP QKLSKMPEGF PRRSTVANGV RSRASRRFLV  60
   61 VGGALLLSLF AIYEMGAVFS IGGITPLEYL VLALFAVNFC WIALAFCSGI AGFLILLRKP 120
  121 RAKDLQVTEL HTRTAILMPT YNESPDRVFS AVSVMAETLS QTGHGHAFDW FILSDTTDPD 180
  181 IALLEEQAFL VLRQETHKHS RVYYRRRRKN VARKAGNVAD FCRRWGSRYD HLLVLDADSL 240
  241 MESSTITGLA QRMQADPDAG LIQTIPSLIN GTTLMARLQQ FAARIYGPVI GTGLGWWVQK 300
  301 EGNFWGHNAI IRTEAFMTAA GLPNLKGKPP FGGHIMSHDF VEAALIRRAG WSVVIAYDLP 360
  361 GSYEECPPSI IDLAVRDRRW CQGNLQHSRI LPTKGLHWVS RLHLLTGIMA YLSSPFWLML 420
  421 ILTGLMLALQ AHFIRPEYFT DQFSLFPTWP IMDSDRALRL FYITMGVLFG PKVFGVLLLL 480
  481 KDGEFARSVG GRIKAIFSVI FEVILSALIA PIMMFIHCGA VMSILMGRDS GWSPQRRDDG 540
  541 SMPWMTLIYR HRWHMLAGVM LGYAAILDSL TLLAWMSPAL IGLWIAVPIS AWTGSVKIGE 600
  601 VFKRAGILAT PEERNPAQIC LQAHEARAAY QKHIAEPWTL AQVLKDPALM ELHLAMVDKQ 660
  661 PLRAAGTPIE AMEAIVHVKV HEARCQQSAL AVLNRQEMAM VLANPLMLRS LQKLPEQFVE 720
  721 EDLVSFC

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