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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68542980, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPTRPFRPL ILAIAMALPL LSSPSLLAEE SSIFSQMATA QPVWAKHGMV ASQETLASRT  60
   61 GVEILKQGGN AVDAAVAVAF SLAVTLPRAG NIGGGGFMLV HIAKENKTIA IDYREMAPSK 120
  121 AKKDIFLDEN GDAVEKLSRE HGLAVGVPGT VMGMSLALEK YGTMTLAQVA APAIKMAQEG 180
  181 ISVTPDLAES LAGLKRRMTQ WPTTAAIFYK ADGSDYQVDD ILKQPELAHS LSLIAEKGTK 240
  241 GFYEGETATK LINAVKDAGG IMTLDDLKNY KVVEREPVRG EYRGYEVVSM PPPSSGGVHI 300
  301 IEMLNVLQQF PIDKLGHNTA QTIHLMAETM KHAYSDRSEY LGDPDFYKVP VKALTSKDYA 360
  361 QKIASQIAMN KTTPSAEIKP GKLAPYESDQ TTHFSVVDKW GNAVSNTYTL NFSYGSGLVA 420
  421 KGTGILLNNE MDDFSAKPGV PNGYGLVGGD ANAVEGNKRP LSSMSPTIVM KDGKPFLVTG 480
  481 SPGGSRIITT TLQIIMNVID HGLNIAEASN AARVHHQWLP DELRVESSLN RDTISLLEAK 540
  541 GHKVKVQSAM GSTQSIMVTE QGIFGASDPR HSGSEAIGY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle