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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68543356, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKSKLRTFR SRILSHIALP LILIMASVYA VNAWFSYLSS EKRLYHSLTQ EASHSASRLQ  60
   61 LLLEHAQANT QGLADFIGFL SSKEDMNDTE SVKSVLMNRL KRNPDFFGSA VAFKPNTFPN 120
  121 RKLFSPYVYR DTSGSDDLHY LDIGAEGYDY TDGTWDWWNN AINQAAGYWS KAYFDEGAGN 180
  181 ILMVTYSAPF GEAEHYFGVA TVDLALDGLP KQLGIAPNRL VVLDDQGRLI YHVDREKVLA 240
  241 TTSTQWLDKN KYRNADFWAL QAKGLDGQAR FVDDKDVVYL ASIATVPQLK WRVIVLAPEQ 300
  301 ELFSSLLDDM ASIILNLSLL TLLLLLTCYL AAKRLTRPLE LLESGILSFG QGKTQQLIVP 360
  361 KGAVSEIVTL SNTFNQMAEL LAEREQAILD SRGNRFARLI DGMSDKSFYC SLDPDGQLAQ 420
  421 VSEGVTKVLG ISPDLLKRKY QRLFSANPLN EKNWQYTDFA LKGQNVPSHQ VEMLDDQGHL 480
  481 RRLDVFMQPL MSDTGELMSV EMLFTDVTEQ FSAAVWSNAV LEAAPEAMLI VDELGQIVFT 540
  541 NSRCLQLFGY ETGAMLGLQV EALLPQEYGE RHVLERQTFL REGRDRSMAN ARHVRALKAD 600
  601 GNEFIAEIAL SILPTAFDGQ RQVAASIRDM TQKLAVEQKI RDSEQRFRGL VTNIPGAVYR 660
  661 TRIGDVWFME YISDNIAEIT GYAASQFIEN RQRTFASLIL EEDRPTCHLH IDRALAQQET 720
  721 FEVEYRIRHR DGSIRWVHEK GKASYTEEGI PLWFDGSIDD ITESKLALVQ LEQSRQQMTN 780
  781 ITESIPCTVY QLQWHSPIDR RFTFLSGAAM KMLGLHRDDL MSNFDIIAER IFDEERPDVV 840
  841 RALSGQSEDR LQWIREFRYR HPNGSIRWME AGASGHLGEE GAITWNGYVM DITQRKTIEQ 900
  901 ELALSEAHFK ALFDGATIGI VNVDIKGVIL DCNDQFCADM ALSRNHLRNT AIFEVLSEQD 960
  961 QPIAKAQFQE LVEGKIDHYR GERSFIRPSG APLWMTVNVS ALLDAQGQFE SAVISMVDMT1020
 1021 ELKLLSDELL LAKEQADAAS KAKGDFLANM SHEIRTPMNA IIGMSQLCLQ TELDKKQKNY1080
 1081 VEKIERASQS LLSIINDILD FSKIEAGKLD IDSVPFQLDT MLEDLSDMFS EKAAHKQIEL1140
 1141 LFAVAPNVPR YLLGDSLRLG QVLINLMNNA IKFTERGEVL LSLSLVEQQD DDVVLRFSVR1200
 1201 DSGIGLTEQQ QAKLFKSFTQ ADTSTTRKYG GTGLGLAICK QLVELMGGKI GVESQFGHGS1260
 1261 TFYFTVKLHI SDGQKLVLEQ ELEGMSVLVV DDNATARDIM RTTLESMGFR VDTVRSGEEA1320
 1321 ISRCLLQAYE VALIDWKMPN MDGLETARQI QLQAQSQSQS QPQSHPQPKI LMVSAHADHE1380
 1381 FLTQIEQLAL AGYISKPISA SRLLDGIMNA IGREGILPVR RRTEELAPQL LVPLQGKRIL1440
 1441 LVEDNEMNLE VASEFLEQVG IILSIATNGQ IALDKLSQQH FDLVLMDCQM PVMDGYQATQ1500
 1501 AIRKRPELAN LPVVAMTANA MAGDRDMCIR AGMNDHIAKP IEVNVLYQTL LKYLAPASET1560
 1561 AAVDTFTQSI LSNTKGEAGN SAEQTVLLKW PEHPELDIDR GLQLVQHSTR LYQRIFDRFV1620
 1621 SSQRNVVEQV RKAIAANQIE DAVRIAHTLK GLAGNLSSAK LVELARLLEL HLTENAPFED1680
 1681 ELVQIQPLVA SICDAIEYAK PAAVNQAEPQ AVDLLSAEDL RAALQALRQN LDDADASAVA1740
 1741 KIDALKPQVN SAMWQALSPA LSMINQYQFD EAIDLIDDVI AQLG

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